Right off the bat, I was unpleasantly surprised to see no Buzz animatronic in the queue. That is a criminal break from Disney and Toy Story shooting ride tradition! Every other one manages to have a Buzz / Potato Head animatronic in or near the queue (with WDW's two rides being particularly sequential) for good reason... it adds life and energy to the wait. If the imagineers substituted it with something better here, I would be more forgiving. But I feel that the queue is more or less another SDL decorated box, in a park with too many linear/plain/flat queues and decorated boxes.
Second, it's considerably shorter than the other versions. But I agree that the three minutes it does last are less cheap, comic-like, cardboard-like, etc. than its siblings. And that's a big plus. However, for me, it's outweighed by the minuses.