I voted for Tower. Can't wait to see what DCA's will be like! Indy has a great queue, very detailed, and HUGE, it's almost part of the ride. Takes quite a while to walk through, containing several rooms, and caves. Rodger is great too, you walk through an indoor version of ToonTown, where you can hear different characters talking behind closed doors, and even get fleeting glimpses of Jessica & Baby Herman.
As for WDW, other queues I like...
Rockin' Rollercoaster
Great Movie Ride
Tough To Be A Bug (best views of the Tree Of Life)